Back to Use Cases

Manuscript Quality Assurance Before Submission

Authors preparing manuscripts for journal submission face significant risks if their reference lists include papers that have been retracted, heavily disputed, or contradicted by subsequent research.

📌Key Takeaways

  • 1Manuscript Quality Assurance Before Submission addresses: Authors preparing manuscripts for journal submission face significant risks if their reference lists...
  • 2Implementation involves 4 key steps.
  • 3Expected outcomes include Expected Outcome: Authors using Reference Check report catching an average of 2-3 problematic citations per manuscript that would have otherwise gone unnoticed. This proactive quality assurance reduces revision requests from reviewers and protects author reputation by ensuring citations meet research integrity standards..
  • 4Recommended tools: sciteai.

The Problem

Authors preparing manuscripts for journal submission face significant risks if their reference lists include papers that have been retracted, heavily disputed, or contradicted by subsequent research. Citing problematic sources can undermine the credibility of the entire manuscript and may result in rejection during peer review or, worse, post-publication criticism and corrections. Manually checking each reference against retraction databases and reviewing how each cited paper has been received is impractical for manuscripts with dozens or hundreds of references. Authors need efficient tools to ensure their citations meet the highest standards of research integrity.

The Solution

Scite's Reference Check tool provides comprehensive quality assurance for manuscript reference lists in minutes rather than hours. Authors simply upload their manuscript or paste their reference list, and the system automatically analyzes each citation against Scite's database of over 35 million full-text articles. The tool identifies any retracted papers, flags citations that have received significant disputing citations, and highlights papers with concerning citation patterns. For each flagged reference, authors receive detailed information about the issues identified, including links to retractions, disputing citations, and alternative papers that might serve as better sources. Authors can then make informed decisions about whether to retain, replace, or add context to problematic citations before submission.

Implementation Steps

1

Understand the Challenge

Authors preparing manuscripts for journal submission face significant risks if their reference lists include papers that have been retracted, heavily disputed, or contradicted by subsequent research. Citing problematic sources can undermine the credibility of the entire manuscript and may result in rejection during peer review or, worse, post-publication criticism and corrections. Manually checking each reference against retraction databases and reviewing how each cited paper has been received is impractical for manuscripts with dozens or hundreds of references. Authors need efficient tools to ensure their citations meet the highest standards of research integrity.

Pro Tips:

  • Document current pain points
  • Identify key stakeholders
  • Set success metrics
2

Configure the Solution

Scite's Reference Check tool provides comprehensive quality assurance for manuscript reference lists in minutes rather than hours. Authors simply upload their manuscript or paste their reference list, and the system automatically analyzes each citation against Scite's database of over 35 million ful

Pro Tips:

  • Start with recommended settings
  • Customize for your workflow
  • Test with sample data
3

Deploy and Monitor

1. Complete manuscript draft with all references 2. Upload manuscript to Scite Reference Check 3. Review automated analysis of each citation 4. Investigate flagged references in detail 5. Replace or contextualize problematic citations 6. Re-run Reference Check to confirm improvements 7. Submit manuscript with confidence

Pro Tips:

  • Start with a pilot group
  • Track key metrics
  • Gather user feedback
4

Optimize and Scale

Refine the implementation based on results and expand usage.

Pro Tips:

  • Review performance weekly
  • Iterate on configuration
  • Document best practices

Expected Results

Expected Outcome

3-6 months

Authors using Reference Check report catching an average of 2-3 problematic citations per manuscript that would have otherwise gone unnoticed. This proactive quality assurance reduces revision requests from reviewers and protects author reputation by ensuring citations meet research integrity standards.

ROI & Benchmarks

Typical ROI

250-400%

within 6-12 months

Time Savings

50-70%

reduction in manual work

Payback Period

2-4 months

average time to ROI

Cost Savings

$40-80K annually

Output Increase

2-4x productivity increase

Implementation Complexity

Technical Requirements

Medium2-4 weeks typical timeline

Prerequisites:

  • Requirements documentation
  • Integration setup
  • Team training

Change Management

Medium

Moderate adjustment required. Plan for team training and process updates.

Recommended Tools

Frequently Asked Questions

Implementation typically takes 2-4 weeks. Initial setup can be completed quickly, but full optimization and team adoption requires moderate adjustment. Most organizations see initial results within the first week.
Companies typically see 250-400% ROI within 6-12 months. Expected benefits include: 50-70% time reduction, $40-80K annually in cost savings, and 2-4x productivity increase output increase. Payback period averages 2-4 months.
Technical complexity is medium. Basic technical understanding helps, but most platforms offer guided setup and support. Key prerequisites include: Requirements documentation, Integration setup, Team training.
AI Research augments rather than replaces humans. It handles 50-70% of repetitive tasks, allowing your team to focus on strategic work, relationship building, and complex problem-solving. The combination of AI automation + human expertise delivers the best results.
Track key metrics before and after implementation: (1) Time saved per task/workflow, (2) Output volume (manuscript quality assurance before submission completed), (3) Quality scores (accuracy, engagement rates), (4) Cost per outcome, (5) Team satisfaction. Establish baseline metrics during week 1, then measure monthly progress.

Last updated: January 28, 2026

Ask AI